Search for virulence genes in whole genome sequencing read data.
Select your organism of interest, whether you have paired- or single-end reads, and drop your sequencing read files onto the target. Your read files will be uploaded and then analyzed using Short Read Sequence Typing (SRST2, ref) to identify known virulence genes. There is currently a 4 GB total file size upload limit in place, which may be raised in the future. You may subsample your reads to an acceptable file size before submitting by following the procedure described here.
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